Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015930064.1_cds_XP_016477219.1_68970
CDS Infomation	[gene=LOC107798703] [db_xref=GeneID:107798703] [protein=putative E3 ubiquitin-protein ligase LIN-1 isoform X2] [protein_id=XP_016477219.1] [location=join(85436..86160,86291..86363,86566..86814,86939..87009,87095..88261,88696..88837,89398..89643,90232..90526,91241..91362,91889..92008,92322..92453,92543..92665,92804..92914,93004..93150,93215..93340,93590..93706,94009..94026)] [gbkey=CDS]
Sequence	ATGTCACATAATTCAATGGCTGCTGCATCTTCTTCGTCTGCTGTTGCTACCCCTCCTCCT GTCTTTTCATATGACGACGATAAACTAGACCTTGAATCAGTCTGTGCATTCGTCGCTGTT ATCAATCAACATATAACTGAATTTCTTGAAGATACAAAATCTCGGAAATGCTTGAAATTG AAATGCAGTTCAAAGCTTGATGTTTGTAATAGAGGGTACCTTGAATTCTCCGAGCAATCA ATATTGTCGAATCTTTATTGGGGGATAGAGAGTATAGAAGCAGCAATTCAAGCAAAATGG ACCGCAGAGAAAACATCAAGGCTGCAGAATTCAGAGAACATGCTTCAAGTTCCAGCTTCA CTTGATGAGCAAGGAGAAACAGCAGGAATTCCGAACAACTATTTGATAGGCTATTCTTAC TTTTACCTCTCCCTTGTTAGAAAGCTCCAAGGAGATGAGTGGCAGGTCGCGATGCATTTT CTTCAAGCTCTTGTAGTATCCCCGAGGCTTCTTTACACTGAAATTGCTACGGACCTCTGC CAACGTTTGTTTATCTTAAGCTTTGAGCATGAATCGAAAGAATTTAAATCCGCATCTTTT ATCAATCTTGATGAGAATGTTAAGATGGTAAAAATGGCGAGAAGATATAAAGCTTGGCTG ATGTATTATCAGATTATGTCTTCTGGAGAGGGTTCTCTAAAGAATGATGAATTAGAACAG ATAATGAGTAAGAAGTCCAGAAGCACAAGATCCTCAAATTTATGTAAGCATGGAAACGAC CGGTGCACCTGTCAAAATTTTGAGAAGGTGCATCCATTTAATGCCCAAAATGATGCCAAT AATGAGGAAGAAAAGATGATTATCAAATCCAACGAGTCCGTAGAGCAAAATCAGGTAGCT ATTACCGAATTAAGGAGTGGTGTAGCAGAAATACCCAAGAACTCAACCACCAAATGCCTC AAAGATATATTGCTTGATTCTGAGCCAGAGACACCAATCTACGTAGATTTCAGCGACAGC GGTTCTGCAAATGAAAATAGTCATGAGGAATACGCAGAAGACCTGGAAATCACTTCAAAC TGGAGCCTAGAAAATCAGCACACAGAGGCTTTTTATCAGAACCAGCAATCTTCTCGCTCC TCGTTTTTGGAAAGCTTGGTTTGTAAATCCCAAGTTTCTGGATTAAGGCACAAAGAAGAA AGCCAAGTAGAAATAACTAACTCACTCTCCAGAAGAGTCTCCGGTTCATTTACTCATACT GATTTATCAGCAAAAGGAATTAGAAGCCTCAAAACTAACATAAATTTGAGTGGTAATAAT GAAGCTGCAACTATGCAACAGTGCTTACAGATGATTGATAGTAGATCCGATGGATATCCA GTGTCCATGTCTTTACATGATTATCAGCTCTGCAAAACACAGTACCCAAGGATTTCTTCA CGGCAAAAGAACAGGTGCAAGAAGACCTTAAATGAAATATCTGAATATGCTGAAGAAAAT TCTCAAGCAGAACAAGCAGCAATACTTGAGAAAATAATTTCGAAGTTATGTTTCTCAGAA GAGTTTGGGGATTATAAAGACTATACAGTTGATCTTACAACAATATATGAGTTACTGAAT AACAAAACAGGACTTAAGTATTCTTTGCTAAAGGACATAATCATTGATCAACTTCTAAGG GCTATATCAACATCCAGAGAAGAACATGTGATACGGGAATCGGTATCAGTCCTATCAATT ATTATTTCAAGGAACAGATCACTTGTTGAAGATGTCAAGAGGAAAGGGTTACAGTTGAAT CATTTGGCAACTGCTCTTAAGAAAAATGTTCATGAAGCAGCTATACTAATATACTTAATA AACCCATCTCCTGCAGAAATCAGGACATTAGAACTTTTACCATGTCTTGTGGATGTGGTG TGTGCTTCAAACAGTTACAAATGTAGCCTAACAACACTGTGGATAACACCTCCTGCAGCG TCATTGATGATTATGGAAGCACTAGTCACTGCATTTGACTATACATCGAGCGACACACAA TTAGCTGTGATCAGCTCACCCAGAGTACTCTCCGGGCTCTTGGATGTCTCAAGGAACAAC AACCTTGAAGAGATTATTGCTCTGGCTGCTGTTCTTATCAGATGTATGCAATTCGATGGT CAATGCAGAAAACACATAAACCATTACGCTCCTGTGGCCCCATTTATCTCTCTTTTAAGA AGCAACCATAAGCGTGCAACATCAATTGCATTGGAGTTTTTTCATGAACTGCTACAAATT CCAAGGTCATCAGCAACTGAGGTACTGCAGAAAATACAACAAGACGGAAGCAACAACAAT ATGTGTGCATTATTGCTCCTCGTCCAAAACTCACAACCAGAGTACAAAATTTTGGCAGCA AATTTGTTGCTTCAGTTAGACATGCTGGAAGAAACATCTAGTAAATTTGTATACTGTGAA GAGGCTATGGAAGCCCTACTTGAGTCAGTGACATGTGAAGAGAATTCTGCGACACAGGCT CTATCAGCATTCATCCTATCCAATTTTGGCGGAACGTGCTCTTGGTCAGGAGAACCTTAC ACAATACCATGGTTGCTTAAAAAGGCTGGATTAACTTCACTGCAACATAAGAACATGATA AAGAATGTTGACTTCTCAGATCAATGTCTACAGGATGTTGGCATAGAGACATGGTGCAGC AAAGTAGCAAAGCGCTTCTTAAAATTTGGAAGTCCTCTCTTCCATGCTTTAGAGAAAGGA CTTAAGAGCAACTCGAGGAGCACTTCCCGAGACTGTCTTGCCGCTACTGCATGGATTGGG TCTGAAATCATGAAAGCCTCAGATGATTTGAGATATGCAGCCTGTGAGATCTTACTTAGT AGAATTGAGCAATTTGTGCATCCAGGATTGGAGCTTGAAGAGAGGCTATTAGGATGTCTT TGTATCTATTATTATACTTCTGGAAGAGGGATGAAAAAGTTAGTCAACTTCTCAGAAGGA GTTAGAGAGTCACTAAGACGTCTTTCCAGTATCAGTTGGATGGCAGAAGAATTGCTTAAG GTTGCTGACTATATCCAGCCAAACAAGTGGAGAATATCTTGTGTTCACACACAGATTCTC GAGGTGGGAAGCAACCATAGCGGAGCAGTAACTTCGCTCATCTTCTATAATGGACAGCTT TACAGTGGACATGCTGATGGCTCAATCAAGGCGTGGGACATCAAAGGACAAGCAGCGACA CTTGTCCGGGACGTGAAGGAGCATAAAAAGGCTGTGACATGCTTTGCCATTTCTGAATCG GGGAATTGCCTGTTGAGTGGATCTGCTGACAAAACAGCAAAGATTTGGCAAATGCTTGAA AGAAATCTTGAATGCGTAGAGACTATACTGACGAAAGATCCAATTCAGAATATTAACACA CACGGAGAACAGATTTTTGCAATTACCCAAAGCCACAAAATGAAGGTGTTTGATGGATCA CGAAAATCCAGTAAATATTTTACGAATAAATCCGTAAGGTGTGGAATATTGACACACGGA AAGCTTTATGTAGGCTGCACAGATTCAAGCATACAGGAGTTAGCTATAGCAAACAGCAGG CAGCAAGAGATCAAAGCGCCATCAAAGATTTGGAGTATGAAAAACAAGTCTGTGAACTCA TTAGCCGTATATAAAGACTGGATATATAGTGCAAGTTCAATGGTTGAAGCTTCACATATA AAGGAATGGAGAAAAAACAAGAAGCCCCAAATATCAATGACGCCAGAAAAGGGATCCAAT GTGTTGGCGATGGAAGTAGTGGAGGACTTCATATATTTAATTTGCAGCGCATCAATGAGC AACATCCAGATTTGGCTGAGAGGAACACAGCACAAAGTTGGAAGATTATCAGCAGGCAGC AAGATAACAAGTCTTCTGACAGCAAATGACATAATTATATGCGGTACAGAAACAGGAATG ATTAAGGGTTGGATTCCCCTCTAG

Peptide Sequence

PEP ID	XP_016477219.1
PEP Infomation	PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Nicotiana tabacum]
Sequence	MSHNSMAAASSSSAVATPPPVFSYDDDKLDLESVCAFVAVINQHITEFLEDTKSRKCLKL KCSSKLDVCNRGYLEFSEQSILSNLYWGIESIEAAIQAKWTAEKTSRLQNSENMLQVPAS LDEQGETAGIPNNYLIGYSYFYLSLVRKLQGDEWQVAMHFLQALVVSPRLLYTEIATDLC QRLFILSFEHESKEFKSASFINLDENVKMVKMARRYKAWLMYYQIMSSGEGSLKNDELEQ IMSKKSRSTRSSNLCKHGNDRCTCQNFEKVHPFNAQNDANNEEEKMIIKSNESVEQNQVA ITELRSGVAEIPKNSTTKCLKDILLDSEPETPIYVDFSDSGSANENSHEEYAEDLEITSN WSLENQHTEAFYQNQQSSRSSFLESLVCKSQVSGLRHKEESQVEITNSLSRRVSGSFTHT DLSAKGIRSLKTNINLSGNNEAATMQQCLQMIDSRSDGYPVSMSLHDYQLCKTQYPRISS RQKNRCKKTLNEISEYAEENSQAEQAAILEKIISKLCFSEEFGDYKDYTVDLTTIYELLN NKTGLKYSLLKDIIIDQLLRAISTSREEHVIRESVSVLSIIISRNRSLVEDVKRKGLQLN HLATALKKNVHEAAILIYLINPSPAEIRTLELLPCLVDVVCASNSYKCSLTTLWITPPAA SLMIMEALVTAFDYTSSDTQLAVISSPRVLSGLLDVSRNNNLEEIIALAAVLIRCMQFDG QCRKHINHYAPVAPFISLLRSNHKRATSIALEFFHELLQIPRSSATEVLQKIQQDGSNNN MCALLLLVQNSQPEYKILAANLLLQLDMLEETSSKFVYCEEAMEALLESVTCEENSATQA LSAFILSNFGGTCSWSGEPYTIPWLLKKAGLTSLQHKNMIKNVDFSDQCLQDVGIETWCS KVAKRFLKFGSPLFHALEKGLKSNSRSTSRDCLAATAWIGSEIMKASDDLRYAACEILLS RIEQFVHPGLELEERLLGCLCIYYYTSGRGMKKLVNFSEGVRESLRRLSSISWMAEELLK VADYIQPNKWRISCVHTQILEVGSNHSGAVTSLIFYNGQLYSGHADGSIKAWDIKGQAAT LVRDVKEHKKAVTCFAISESGNCLLSGSADKTAKIWQMLERNLECVETILTKDPIQNINT HGEQIFAITQSHKMKVFDGSRKSSKYFTNKSVRCGILTHGKLYVGCTDSSIQELAIANSR QQEIKAPSKIWSMKNKSVNSLAVYKDWIYSASSMVEASHIKEWRKNKKPQISMTPEKGSN VLAMEVVEDFIYLICSASMSNIQIWLRGTQHKVGRLSAGSKITSLLTANDIIICGTETGM IKGWIPL

Transcript Sequence

Gene sequence data has not been registered.